Benjamin R.
Wucher

Position Postdoctoral Research Associate
Institution Memorial Sloan Kettering
Laboratory Xavier Lab · SKI
Research Focus Microbial Ecology · Imaging
New Preprint · bioRxiv · April 2026 Metabiosis underlies a microbiota permissive to Pseudamonadota and increases the risk of gut-borne bloodstream infection
Benjamin R. Wucher

My research applies the principles of ecology to understand how microbial communities form, compete, and persist within host environments. The central thesis driving my work is that infection is fundamentally an ecological phenomenon — shaped not just by the intrinsic properties of individual cells, but by the spatial architecture those cells create as they grow together in structured communities called biofilms.

During my doctoral training at Dartmouth College in the laboratory of Carey Nadell, I established that the three-dimensional organization of bacterial biofilms is a primary determinant of ecological outcome. Using single-cell confocal microscopy and quantitative image analysis, I demonstrated that a community's physical structure — how tightly cells are packed, how clonal lineages are spatially arranged, how space is partitioned between cohabiting species — governs susceptibility to predatory bacteria and bacteriophage. These findings reframed biofilm matrix production not merely as a chemical shield, but as an architectural strategy with profound population-level consequences.

As a postdoctoral fellow at Memorial Sloan Kettering Cancer Center in the Xavier laboratory, I have expanded this ecological framework from in vitro biofilm communities to the complex chemical environment of the infected host. My current work investigates how the metabolic activities of gut commensal bacteria reshape the local environment in ways that directly alter the colonization dynamics and antibiotic sensitivity of opportunistic pathogens such as Pseudomonas aeruginosa. This line of research establishes that host-associated microbial communities actively sculpt the conditions under which pathogens establish infection — adding a new ecological and metabolic dimension to our understanding of treatment failure and resistance.

My goal is to build a research program that uses ecological principles as a framework for understanding polymicrobial infection — and translating those insights into better treatment outcomes. The central premise is that micrometer-scale ecological interactions among co-infecting species are primary determinants of disease severity, antibiotic tolerance, and treatment failure. By integrating clinical microbiome data with quantitative single-cell imaging systems, my laboratory will resolve the spatial and metabolic ecology of multispecies infections at the resolution of individual cells within the host environment. This mechanistic clarity — connecting community-level ecological dynamics directly to treatment response — will transform how we think about polymicrobial disease and open new ecological angles for therapeutic intervention.

02 · Publications

Publications

03 · Background

Education &
Training

  • 2022 – Present Post-Doctoral Research Associate Memorial Sloan Kettering Cancer Center, New York NY Advisor: Joao B. Xavier · Xavier Lab, Sloan Kettering Institute
  • 2017 – 2022 PhD — Biological Sciences Dartmouth College, Hanover NH Advisor: Carey D. Nadell
    Dissertation: Consequences of biofilm architecture on Vibrio cholerae ecology and life history
  • 2013 – 2017 BS with Honors — Microbiology & Immunology University of Rochester, Rochester NY Advisor: Paul M. Dunman

 

Fellowships &
Awards

  • Life Science Research Foundation Fellowship Finalist 2024
  • Dartmouth Dept. of Biological Sciences Gilman Fellowship 2019–2022
  • Albert J. Ryan Fellowship 2020
  • US Dept. of Education GAANN Fellowship 2018–2019
  • MCB Fellowship Award 2017

04 · Contact

Get in
Touch

I welcome inquiries from potential collaborators interested in the ecology of polymicrobial infection and biofilm communities — whether in clinical microbiology, single-cell imaging, or computational approaches to infection biology.